CDB25:0004566 Pcdhb7 — Pcdhb7

Experimentally validated in Mouse; Orthology-inferred in Rat

Title

Journal:; Year Published:

Abstract

Single-cell identity generated by combinatorial homophilic interactions between α, β, and γ protocadherins.

Cell, 2014; PubMed, Mus Musculus Pcdhb7 — Mus Musculus Pcdhb7
ABSTRACT: Individual mammalian neurons stochastically express distinct repertoires of α, β, and γ protocadherin (Pcdh) proteins, which function in neural circuit assembly. We report that all three subfamilies of clustered Pcdhs can engage in specific homophilic interactions, that cell surface delivery of Pcdhα isoforms requires cis interactions with other Pcdhs, and that the extracellular cadherin domain EC6 plays a critical role in this process. Examination of homophilic interactions between specific combinations of multiple Pcdh isoforms revealed that Pcdh combinatorial recognition specificities depend on the identity of all of the expressed isoforms. A single mismatched Pcdh isoform can interfere with these combinatorial homophilic interactions. A theoretical analysis reveals that assembly of Pcdh isoforms into multimeric recognition units and the observed tolerance for mismatched isoforms can generate cell surface diversity sufficient for single-cell identity. However, the competing demands of nonself discrimination and self-recognition place limitations on the mechanisms by which homophilic recognition units can function.
Basic Information on Pcdhb7
Ligand Name: protocadherin beta 7
Other Symbols: Pcdhb4B, PcdhbG
Ligand Location: cell membrane based on uniprot
Ensembl Gene Symbol Report: Pcdhb7 (not in the official report)
MGI: Pcdhb7
NCBI: Pcdhb7
Functional Annotations for Pcdhb7
Gene Ontologies: Mouse Genome Informatics, quickGO

Expression Profile: Expression Atlas (RNA) (no ensemble gene id), GEO (RNA and protein), Allen Brain Atlas (RNA), Mouse Cell Atlas 1.1 (RNA)
Disease Annotations: MalaCards (Mouse-specific), AI summary (LLM)
Interactions with other Receptors for Pcdhb7
Basic Information on Pcdhb7
Receptor Name: protocadherin beta 7
Other Symbols: Pcdhb4B, PcdhbG
Receptor Location: cell membrane based on uniprot
Ensembl Gene Symbol Report: Pcdhb7 (not in the official report)
MGI: Pcdhb7
NCBI: Pcdhb7
Functional Annotations for Pcdhb7
Gene Ontologies: Mouse Genome Informatics, quickGO

Expression Profile: Expression Atlas (RNA) (no ensemble gene id), GEO (RNA and protein), Allen Brain Atlas (RNA), Mouse Cell Atlas 1.1 (RNA)
Disease Annotations: MalaCards (Mouse-specific), AI summary (LLM)
Interactions with other Ligands for Pcdhb7