CDB20:0002920 SLITRK1 — PTPRS

Experimentally validated in Human, Mixed species, Rat; Orthology-inferred in Human, Mouse, Frog, Zebrafish, Chicken, Macaque, Pig, Dog, Cow, Chimp, Horse, Marmoset, Sheep, Rat

Title

Journal:; Year Published:

Abstract

Slitrks control excitatory and inhibitory synapse formation with LAR receptor protein tyrosine phosphatases.

Proceedings of the National Academy of Sciences of the United States of America, 2013; PubMed, Homo sapiens SLITRK1 — Homo sapiens PTPRS
ABSTRACT: The balance between excitatory and inhibitory synaptic inputs, which is governed by multiple synapse organizers, controls neural circuit functions and behaviors. Slit- and Trk-like proteins (Slitrks) are a family of synapse organizers, whose emerging synaptic roles are incompletely understood. Here, we report that Slitrks are enriched in postsynaptic densities in rat brains. Overexpression of Slitrks promoted synapse formation, whereas RNAi-mediated knockdown of Slitrks decreased synapse density. Intriguingly, Slitrks were required for both excitatory and inhibitory synapse formation in an isoform-dependent manner. Moreover, Slitrks required distinct members of the leukocyte antigen-related receptor protein tyrosine phosphatase (LAR-RPTP) family to trigger synapse formation. Protein tyrosine phosphatase σ (PTPσ), in particular, was specifically required for excitatory synaptic differentiation by Slitrks, whereas PTPδ was necessary for inhibitory synapse differentiation. Taken together, these data suggest that combinatorial interactions of Slitrks with LAR-RPTP family members maintain synapse formation to coordinate excitatory-inhibitory balance.

PTPσ Drives Excitatory Presynaptic Assembly via Various Extracellular and Intracellular Mechanisms.

The Journal of neuroscience : the official journal of the Society for Neuroscience, 2018; PubMed, Rattus norvegicus Slitrk1 — Homo sapiens PTPRS
ABSTRACT: Leukocyte common antigen-receptor protein tyrosine phosphatases (LAR-RPTPs) are hub proteins that organize excitatory and inhibitory synapse development through binding to various extracellular ligands. Here, we report that knockdown (KD) of the LAR-RPTP family member PTPσ reduced excitatory synapse number and transmission in cultured rat hippocampal neurons, whereas KD of PTPδ produced comparable decreases at inhibitory synapses, in both cases without altering expression levels of interacting proteins. An extensive series of rescue experiments revealed that extracellular interactions of PTPσ with Slitrks are important for excitatory synapse development. These experiments further showed that the intracellular D2 domain of PTPσ is required for induction of heterologous synapse formation by Slitrk1 or TrkC, suggesting that interaction of LAR-RPTPs with distinct intracellular presynaptic proteins, drives presynaptic machinery assembly. Consistent with this, double-KD of liprin-α2 and -α3 or KD of PTPσ substrates (N-cadherin and p250RhoGAP) in neurons inhibited Slitrk6-induced, PTPσ-mediated heterologous synapse formation activity. We propose a synaptogenesis model in presynaptic neurons involving LAR-RPTP-organized retrograde signaling cascades, in which both extracellular and intracellular mechanisms are critical in orchestrating distinct synapse types.
Basic Information on SLITRK1
Ligand Name: SLIT and NTRK like family member 1
Other Symbols: LRRC12, KIAA1910
Ligand Location: secreted based on uniprot, cell membrane based on perplexity
HGNC Gene Symbol Report: SLITRK1
GeneCards: SLITRK1
HGNC Gene Group: SLIT and NTRK like family
Interactions with other Receptors for SLITRK1
Basic Information on PTPRS
Receptor Name: protein tyrosine phosphatase receptor type S
Other Symbols: PTPsigma, PTP-sigma
Receptor Location: cell membrane based on hpa, perplexity, uniprot