CDB15:0000337 COL2A1 — ITGA10

Experimentally validated in Human; Orthology-inferred in Mouse, Rat, Frog, Zebrafish, Chicken, Macaque, Pig, Dog, Cow, Chimp, Horse, Marmoset, Sheep

Title

Journal:; Year Published:

Abstract

Isolation, cloning, and sequence analysis of the integrin subunit alpha10, a beta1-associated collagen binding integrin expressed on chondrocytes.

The Journal of biological chemistry, 1998; PubMed, Homo sapiens COL2A1 — Homo sapiens ITGA10
ABSTRACT: We have found that chondrocytes express a novel collagen type II-binding integrin, a new member of the beta1-integrin family. The integrin alpha subunit, which has a Mr of 160 kDa reduced, was isolated from bovine chondrocytes by collagen type II affinity purification. The human homologue was obtained by screening a human chondrocyte library with a bovine cDNA probe. Cloning and cDNA sequence analysis of the human integrin alpha subunit designated alpha10 show that it shares the general structure of other integrin alpha subunits. The predicted amino acid sequence consists of a 1167-amino acid mature protein, including a signal peptide (22 amino acids), a long extracellular domain (1098 amino acids), a transmembrane domain (25 amino acids), and a short cytoplasmic domain (22 amino acids). The extracellular part contains a 7-fold repeated sequence, an I-domain (199 amino acids) and three putative divalent cation-binding sites. The deduced amino acid sequence of alpha10 is 35% identical to the integrin subunit alpha2 and 37% identical to the integrin subunit alpha1. Northern blot analysis shows a single mRNA of 5.4 kilobases in chondrocytes. A peptide antibody against the predicted sequence of the cytoplasmic domain of alpha10 immunoprecipitated two proteins with masses of 125 and 160 kDa from chondrocyte lysates under reducing conditions. The peptide antibody specifically stained chondrocytes in tissue sections of human articular cartilage, showing that alpha10 beta1 is expressed in cartilage tissue.
Basic Information on COL2A1
Ligand Name: collagen type II alpha 1 chain
Other Symbols: SEDC, AOM, STL1
Ligand Location: secreted based on hpa, perplexity, uniprot
HGNC Gene Symbol Report: COL2A1
GeneCards: COL2A1
HGNC Gene Group: Collagens
Interactions with other Receptors for COL2A1
Basic Information on ITGA10
Receptor Name: integrin subunit alpha 10
Other Symbols: N/A
Receptor Location: cell membrane based on perplexity
HGNC Gene Symbol Report: ITGA10
GeneCards: ITGA10
HGNC Gene Group: Integrins
Interactions with other Ligands for ITGA10